Information for 16-CGTGTGTGGAGCT (Motif 20)

A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G A T A G T C A G T C C G T A A G T C C G T A A G T C C T G A A T G C A C T G
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 25.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTGTGGAGCT
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CGTGTGTGGAGCT
-----GTGGAT--
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTGTGTGGAGCT
CGTGGGTGGTCC-
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTGTGTGGAGCT
RGKGGGCGGAGC-
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTGTGTGGAGCT
-NNHTGTGGTTWN
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTGTGGAGCT-
NNVDGGGYGGGGCYN
 A C G T A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTGTGGAGCT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGTGTGTGGAGCT
------CGGAGC-
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGTGTGTGGAGCT
VBSYGTCTGG----
 A C G T A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGTGTGTGGAGCT
-CTGTCTGG----
 A G T C A T C G A G C T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T