p-value: | 1e-8 |
log p-value: | -2.015e+01 |
Information Content per bp: | 1.902 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.6 +/- 29.8bp |
Average Position of motif in Background | 43.7 +/- 13.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAATACAGSWCAC --ATCAAGGTCA- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AAATACAGSWCAC -----AAGGTCAC |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAATACAGSWCAC ----TRAGGTCA- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAATACAGSWCAC TATAAGTAGGTCAA |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAATACAGSWCAC ---CACAGN---- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAATACAGSWCAC--- TCTCAAAGGTCACCTG |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAATACAGSWCAC NNNNTGAATTCANNNC-- |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAATACAGSWCAC CATACAATACGAAATAA |
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ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAATACAGSWCAC AGAGRRACAGCWGAC |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAATACAGSWCAC --AAYTAGGTCA- |
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