Information for 12-TSAGAGKGGSTYA (Motif 12)

A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
Reverse Opposite:
A C G T C T G A C G T A A T C G A G T C A G T C G T C A A G T C A C G T A G T C A C G T A T G C C G T A
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.4 +/- 18.7bp
Average Position of motif in Background78.6 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TSAGAGKGGSTYA--
TGCGGAGTGGGACTGG
 A C G T A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TSAGAGKGGSTYA-
---AAGAGGATTAG
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA-
------NGGATTAN
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TSAGAGKGGSTYA------
--AGAGGGGATTAATTTAT
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TSAGAGKGGSTYA
-TTRAGTGSYK--
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA
CTTGAGTGGCT--
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA
-----NGGGATTA
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA
TGGGTGTGGC---
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA
-TTGAGTGSTT--
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TSAGAGKGGSTYA--
------GGGATTANN
 A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C T G C T A G A T G C A C G T A G C T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G