Information for 16-YCWGGTCAGTCAC (Motif 21)

A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G G C T A A G T C A C G T A C T G C G T A A T G C A G T C C G T A A C T G C T G A
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 24.9bp
Average Position of motif in Background36.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:YCWGGTCAGTCAC
-SCTGTCAVTCAV
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YCWGGTCAGTCAC--
-NAGGTCANTGACCT
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YCWGGTCAGTCAC
--AGGTCA-----
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----YCWGGTCAGTCAC
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YCWGGTCAGTCAC
-NCTGTCAATCAN
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YCWGGTCAGTCAC
-----TGAGTCA-
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YCWGGTCAGTCAC---
ATTGATGAGTCACCAA
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C A C G T A C G T A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YCWGGTCAGTCAC--
---TGTCTGDCACCT
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YCWGGTCAGTCAC
TRAGGTCA-----
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YCWGGTCAGTCAC---
-NTGCTGAGTCATCCN
 A G C T A G T C C G A T A C T G A T C G A C G T A G T C C G T A A C T G C G A T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T