Information for 10-TATAGTCTGGGTT (Motif 11)

G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A G T C C G T A C T A G G T C A A G T C A C G T C G T A G C A T C G T A
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.766
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.8 +/- 26.6bp
Average Position of motif in Background43.6 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TATAGTCTGGGTT
--TWGTCTGV---
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TATAGTCTGGGTT
---GGTCTGGCAT
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATAGTCTGGGTT--
NNTNNTGTCTGGNNTNG
 A C G T A C G T G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATAGTCTGGGTT---
GANTATTATGGGATGGA
 A C G T G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATAGTCTGGGTT---
-NTGGTTTCGGTTNNN
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TATAGTCTGGGTT------
--TATTATGGGATGGATAA
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATAGTCTGGGTT---
-TNAGTTTCGATTTTN
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TATAGTCTGGGTT
--CTGTCTGG---
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TATAGTCTGGGTT----
---AGTTTCGGTTTCGN
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TATAGTCTGGGTT
VBSYGTCTGG---
 G C A T C G T A C G A T C G T A A C T G A C G T G A T C C G A T A C T G A C T G C T A G C G A T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T