Information for 2-TTTATTCGTT (Motif 9)

A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C T A G C G T A C G T A A C G T C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 23.4bp
Average Position of motif in Background26.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTCGTT-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTATTCGTT
TTTTATKRGG-
 A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTCGTT
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTCGTT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTCGTT-
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTCGTT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTCGTT
TTTTATTRGN-
 A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

PH0108.1_Msx3/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTATTCGTT---
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTCGTT
TTTTATGGCTN
 A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTATTCGTT-
GAATGTTTGTTT
 A C G T A C G T A C G T A C G T G T C A A C G T C G A T A G T C A C T G A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T