p-value: | 1e-9 |
log p-value: | -2.200e+01 |
Information Content per bp: | 1.860 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 2.85% |
Number of Background Sequences with motif | 120.2 |
Percentage of Background Sequences with motif | 0.25% |
Average Position of motif in Targets | 63.5 +/- 24.4bp |
Average Position of motif in Background | 54.6 +/- 30.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0099.1_Zfp691_1/Jaspar
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAGTGCTCAC--- CGAACAGTGCTCACTAT |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGTGCTCAC TTGAGTGSTT-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGTGCTCAC TTAAGTGCTT-- |
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Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTGCTCAC CNGTCCTCCC |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGTGCTCAC CTTGAGTGGCT-- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGTGCTCAC CTYRAGTGSY--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGTGCTCAC BTBRAGTGSN--- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGTGCTCAC TTRAGTGSYK-- |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAGTGCTCAC--- NTNTATGTGCACATNNN |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGTGCTCAC---- GGCGAGGGGTCAAGGGC |
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