Information for 3-GMMGSRGGCTCCKGCT (Motif 3)

A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G G T A C G T A C C T A G A C T G C T G A A C T G A G T C A G T C A G T C A T C G G T A C A C G T A C T G A T G C
p-value:1e-11
log p-value:-2.758e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.3 +/- 18.9bp
Average Position of motif in Background60.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GMMGSRGGCTCCKGCT-
-------GCTCGGSCTC
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GMMGSRGGCTCCKGCT
-------GCTCCG---
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GMMGSRGGCTCCKGCT----
-----GGCCYCCTGCTGDGH
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GMMGSRGGCTCCKGCT-
-----SNGCACCTGCHS
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GMMGSRGGCTCCKGCT---
-------CCCCCTGCTGTG
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GMMGSRGGCTCCKGCT--
------GGCTCYAKCAYC
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GMMGSRGGCTCCKGCT
------NGCTN-----
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GMMGSRGGCTCCKGCT
------ACATCCTGNT
 A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GMMGSRGGCTCCKGCT
TGCCTGAGGCN------
 A C G T A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GMMGSRGGCTCCKGCT
NGCCTGAGGCN------
 A C G T A T C G G T A C G T C A C A T G A T G C C T A G T A C G A C T G A G T C A G C T A G T C A G T C A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T