Information for 2-CCAGMGMGGRAKGCCG (Motif 2)

A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
Reverse Opposite:
A G T C A C T G A T C G A T G C G T A C A C G T A G T C A T G C A G T C A C G T A T G C A C G T A T G C A C G T A C T G A T C G
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.714
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.4 +/- 22.6bp
Average Position of motif in Background51.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
---GGGCGGGAAGG--
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
---GGGCGGGACC---
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCAGMGMGGRAKGCCG
CACCCCCGGGGGGG------
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAGMGMGGRAKGCCG
--GGCGGGGGCGGGGG
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
----CCWGGAATGY--
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
----AGAGGAA-----
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
---GGGCGGGAAGG--
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CCAGMGMGGRAKGCCG
----GGCGGGAARN--
 A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGMGMGGRAKGCCG
ACCCCCCCGGGGGGN------
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCAGMGMGGRAKGCCG
TGCCCNNAGGGCA-----
 A C G T A C G T A T G C A G T C G T C A A T C G T G C A A T C G G T C A A C T G A T C G T C A G G T C A C A T G A T C G A T G C T G A C C T A G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T