Information for 7-AGGAGGRGGCGCTGTS (Motif 6)

C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
Reverse Opposite:
T A G C T C G A A G T C C G T A A T C G G T A C C T A G G T A C A G T C A G T C A G T C A G T C A C G T T A G C A T G C A G C T
p-value:1e-15
log p-value:-3.494e+01
Information Content per bp:1.684
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif65.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.3 +/- 18.0bp
Average Position of motif in Background48.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGGRGGCGCTGTS-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGGRGGCGCTGTS
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGGRGGCGCTGTS
NNNAAGGGGGCGGGNNN
 A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGGRGGCGCTGTS
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGAGGRGGCGCTGTS
-GGCGGGGGCGGGGG-
 C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAGGRGGCGCTGTS
-GGGGGGGG-------
 C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGAGGRGGCGCTGTS-
--AAGGKGRCGCAGGCA
 C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGGRGGCGCTGTS
DCHCAGCAGGRGGCC-----
 A C G T A C G T A C G T A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGAGGRGGCGCTGTS
CACAGCAGGGGG-------
 A C G T A C G T A C G T C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGAGGRGGCGCTGTS
AGGGGGCGGGGCTG--
 C T G A A T C G A T C G T C G A C T A G T C A G T C A G T C A G A C T G A G T C A C T G A T G C G C A T T C A G A G C T A T C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T