Information for 6-GTGYCACCTA (Motif 4)

C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
Reverse Opposite:
G C A T C G T A A C T G C A T G C A G T C T A G T C A G A T G C C T G A G A T C
p-value:1e-23
log p-value:-5.310e+01
Information Content per bp:1.669
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.34%
Number of Background Sequences with motif220.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets50.7 +/- 24.8bp
Average Position of motif in Background51.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GTGYCACCTA
-TGTCANYT-
 C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTGYCACCTA
-TGACACCT-
 C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTGYCACCTA
ATGCCAACC-
 C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTGYCACCTA
KTTCACACCT-
 A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTGYCACCTA---
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGYCACCTA
CCTGTCAA---
 A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTGYCACCTA
VGCTGWCAVB--
 A C G T A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTGYCACCTA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGYCACCTA
NTGTCAN---
 C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGYCACCTA
GGTGCCAAGT-
 A C G T C T A G G A C T A T C G A G T C A G T C G C T A G T A C T G A C G C A T C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T