Information for 10-AAAGTGCACGCTA (Motif 18)

C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
Reverse Opposite:
C G A T C G T A A C T G A G T C T C A G C G A T A C T G G A T C C G T A A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.860
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 17.5bp
Average Position of motif in Background70.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCACGCTA
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGTGCACGCTA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCACGCTA
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTGCACGCTA
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTGCACGCTA
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCACGCTA
TTAAGTGC------
 A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAGTGCACGCTA
TAAAAATGCTGACTT
 A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCACGCTA
TTAAGTGCTT----
 A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAGTGCACGCTA--
TACATGTGCACATAAAA
 A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAAGTGCACGCTA-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C T A G A G T C C G T A A G T C C T A G A G T C A C G T G C T A A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T