Information for 8-GAGCTTTCCTTCA (Motif 8)

A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A C T G A A T C G C A T G C T G A G T C A C G T A C T A G A G T C A C G T G T A C
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.771
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.9 +/- 29.3bp
Average Position of motif in Background43.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCTTTCCTTCA
TGACCTTTGCCCCA
 A C G T A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGCTTTCCTTCA
TGACCTTTNCNT--
 A C G T A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGCTTTCCTTCA-
--NCTGTCAATCAN
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGCTTTCCTTCA----
-NNCATTCATTCATNNN
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGCTTTCCTTCA
-ASTTTCACTTCC
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGCTTTCCTTCA
-GSCTGTCACTCA
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGCTTTCCTTCA-
--SCTGTCAVTCAV
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTTTCCTTCA-
TGACCTTTGCCCTAN
 A C G T A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGCTTTCCTTCA
--ATTTTCCATT-
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GAGCTTTCCTTCA-
--GTTTCACTTCCG
 A C T G C G T A C T A G A G T C A C G T A C G T A G C T G T A C A T G C A G C T A G C T A G T C C G T A A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G