Information for 5-CCTCCTAGCA (Motif 5)

G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A
Reverse Opposite:
A G C T A C T G A T G C G A C T G T C A A C T G A T C G G T C A A C T G A C T G
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.806
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif117.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.9 +/- 24.6bp
Average Position of motif in Background54.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTAGCA
CGCCCCCTGACA
 A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTCCTAGCA---
TGTTKCCTAGCAACM
 A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCTAGCA-
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTCCTAGCA-----
CCGCATAGCAACGGA
 G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTCCTAGCA---------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTAGCA
TTCCCCCTAC--
 A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTCCTAGCA-
---CTTGGCAA
 G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTCCTAGCA-----
TACCATAGCAACGGT
 G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTCCTAGCA
CNGTCCTCCC----
 A C G T A C G T A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CCTCCTAGCA--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T T A G C A G T C A C G T C T G A A T C G A G T C C T G A A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C