Information for 4-ATGMCACCTA (Motif 2)

G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T C A T G A C T G A G T C C G T A A C G T
p-value:1e-34
log p-value:-7.858e+01
Information Content per bp:1.840
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif66.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.0 +/- 18.9bp
Average Position of motif in Background45.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----ATGMCACCTA---
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATGMCACCTA
-TGACACCT-
 G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATGMCACCTA---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGMCACCTA
-TCACACCT-
 G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGMCACCTA
-TCACACCT-
 G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGMCACCTA
-TCACACCT-
 G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGMCACCTA
-TCACACCT-
 G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGMCACCTA
KTTCACACCT-
 A C G T G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGMCACCTA----
ACATGCTACCTAATAC
 A C G T A C G T G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGMCACCTA
TTTCACACCTN
 A C G T G T C A A C G T A C T G G T A C G A T C G T C A A G T C A G T C A C G T C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T