Information for 7-TCAAATATTT (Motif 11)

A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T
Reverse Opposite:
C G T A T G C A T G C A A G C T C G T A A G C T A C G T C A G T A C T G C T G A
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.660
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif424.3
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets37.9 +/- 26.8bp
Average Position of motif in Background51.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCAAATATTT-----
-CTAATATTGCTAAA
 A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCAAATATTT-----
-CTAATATTGCTAAA
 A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCAAATATTT
--AATTATT-
 A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAAATATTT-
GGTTAAACATTAA
 A C G T A C G T A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCAAATATTT-----
----ATATTTACATA
 A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCAAATATTT-----
----ATATTTACATA
 A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAAATATTT-
GTTAATNATTAA
 A C G T A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAAATATTT--
CATTAATTATTCAT
 A C G T A C G T A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAAATATTT
AAACAAACATTC
 A C G T A C G T A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTT
NATTCAAAT----
 A C G T A C G T A C G T A G C T T G A C G T C A T G C A T C G A G C A T T C G A A C G T A C G T G C A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T