Information for 6-GCCGCTGTGC (Motif 10)

C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
Reverse Opposite:
T C A G A T G C T C G A T G A C C T G A A C T G T A G C C T A G T A C G A G T C
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.838
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif155.3
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets50.8 +/- 22.4bp
Average Position of motif in Background51.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCCGCTGTGC
---GCTGTG-
 C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCTGTGC--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCTGTGC
CGCAGCTGCG-
 A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCTGTGC
CAGCAGCTGN--
 A C G T A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCTGTGC
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCGCTGTGC
GCAGCTGTNN
 C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGCTGTGC
BAACAGCTGT--
 A C G T A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCGCTGTGC
-CAGCTGTT-
 C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCTGTGC
NNGCAGCTGTT-
 A C G T A C G T C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCGCTGTGC
CCTGCTGAGH
 C T A G A T G C A G T C A T C G A G T C G A C T A C T G A G C T A T C G A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A