Information for 7-KGGGAATTKC (Motif 6)

A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
Reverse Opposite:
A C T G T G A C T G C A G T C A A G C T A C G T T A G C A G T C G T A C T G A C
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.701
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif720.2
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets48.7 +/- 28.7bp
Average Position of motif in Background50.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:KGGGAATTKC-
-GGGAATTTCC
 A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:KGGGAATTKC-
-GGGAATTTCC
 A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----KGGGAATTKC
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:KGGGAATTKC---
-GGGAAATCCCCN
 A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:KGGGAATTKC--
--GGAAANCCCC
 A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-KGGGAATTKC
AGAGGAAGTG-
 A C G T A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---KGGGAATTKC
AAAGRGGAAGTG-
 A C G T A C G T A C G T A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KGGGAATTKC
AGCGGAAGTG-
 A C G T A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-KGGGAATTKC
AGAGGAA----
 A C G T A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:KGGGAATTKC-
-GGGGATTTCC
 A C T G C A T G C T A G A T C G C G T A C T G A C A G T A C G T A C T G T G A C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C