Information for 7-GTCATGAAAT (Motif 6)

A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T
Reverse Opposite:
C T G A A C G T A C G T A C G T A G T C G C T A C G A T C T A G C G T A A G T C
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.838
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif78.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets44.4 +/- 23.2bp
Average Position of motif in Background54.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCATGAAAT
NACAGGAAAT
 A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

HOXC10/MA0905.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCATGAAAT
GTCGTAAAAT
 A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTCATGAAAT--
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTCATGAAAT
GTCATAAAAN
 A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTCATGAAAT--
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTCATGAAAT---
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTCATGAAAT----
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCATGAAAT---
AGAGCCATAAAATTCG
 A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCATGAAAT
GGTAATAAAAA
 A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTCATGAAAT--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G G A C T G A T C G C T A C G A T A C T G C G T A G T C A C G T A G A C T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T