Information for 6-CTGTAATTAC (Motif 5)

G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C
Reverse Opposite:
C A T G G A C T T G C A C T G A G C A T C G A T C T G A T G A C C G T A C A T G
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.657
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif1167.3
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets47.7 +/- 25.6bp
Average Position of motif in Background48.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAATTAC-----
NNNGTAATTACNNATA
 A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAATTAC-----
ACNNTAATTACNNCAN
 A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CTGTAATTAC----
GCGCTATAATTACCGAC
 A C G T A C G T A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CTGTAATTAC----
TCGCGATAATTACCGAC
 A C G T A C G T A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTGTAATTAC-----
AAGGTAATTACCTAAT
 A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0062.1_Hoxb7/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTGTAATTAC---
TNNCATTAATTANTNC
 A C G T A C G T A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0103.1_Meox1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGTAATTAC-----
GAGGTAATTACCTCAG
 A C G T G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G

MEOX1/MA0661.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTGTAATTAC-
-GNTAATTAGN
 G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T
A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGTAATTAC-
-AGTAATTAAC
 G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

MNX1/MA0707.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTGTAATTAC-
-TTTAATTANN
 G T A C G C A T A C T G G A C T G C T A C G T A G A C T A C G T C T G A G T A C A C G T
A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C