Information for 5-ACGCTTTGCG (Motif 3)

G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G
Reverse Opposite:
A T G C C A T G A G T C C T G A C G T A C G T A A C T G A G T C A C T G A C G T
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.7 +/- 19.0bp
Average Position of motif in Background38.4 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACGCTTTGCG
CAAGCTT----
 A C G T G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACGCTTTGCG----
NNGCNCTGCGCGGC
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACGCTTTGCG
---CTTTGT-
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACGCTTTGCG--
--CCWTTGTYYB
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACGCTTTGCG--
--CCTTTGATGT
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ACGCTTTGCG-
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACGCTTTGCG----
----TTTGCGGTTT
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGCTTTGCG
AGGVNCCTTTGT-
 A C G T A C G T A C G T G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACGCTTTGCG--
--YCTTTGTTCC
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACGCTTTGCG
-NGCTN----
 G T C A G T A C C T A G A G T C A C G T A C G T A G C T A C T G G A T C A T C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T