Information for 4-CWCYAGKGGCWAYWYT (Motif 3)

A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
Reverse Opposite:
C T G A T C G A C G A T C T A G A G C T C G A T C A T G G T A C G T A C G T A C A G T C G A C T C T G A C A T G C G T A A C T G
p-value:1e-25
log p-value:-5.917e+01
Information Content per bp:1.622
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.74%
Number of Background Sequences with motif116.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets57.3 +/- 21.4bp
Average Position of motif in Background49.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CWCYAGKGGCWAYWYT
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CWCYAGKGGCWAYWYT
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CWCYAGKGGCWAYWYT
TGCCCTNAGGGCA-----
 A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CWCYAGKGGCWAYWYT
TCCCNNGGGACN-----
 A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CWCYAGKGGCWAYWYT
TCCCCTGGGGAC-----
 A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CWCYAGKGGCWAYWYT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CWCYAGKGGCWAYWYT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CWCYAGKGGCWAYWYT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CWCYAGKGGCWAYWYT
ANTNCCGGGGGGAANTT-
 A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CWCYAGKGGCWAYWYT
ANCCACCTGTTGCNC----
 A C G T A C G T A C G T A G T C G C A T G A T C G A C T C T G A A C T G C A T G A C T G A C T G G A T C C G T A T C G A G A T C C G T A A G C T A G C T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T A C G T