Information for 11-CAAWGAACTA (Motif 11)

A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G C T A C G T A G T C G C A T A G C T A C G T A C T G
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif34.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets62.5 +/- 25.4bp
Average Position of motif in Background50.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CAAWGAACTA
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAAWGAACTA
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAWGAACTA---
AACAAACAACAAGAG
 A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CAAWGAACTA
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAAWGAACTA
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAWGAACTA---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAWGAACTA--
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAWGAACTA
CCAATAAAAC-
 A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAAWGAACTA--
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAAWGAACTA
VRRACAAWGG----
 A C G T A C G T A C G T A C G T A G T C C G T A C T G A C G T A C T A G G T C A C T G A G T A C A C G T C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T