Information for 5-TCTGGTGCCACAT (Motif 2)

C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
Reverse Opposite:
G T C A A C G T A T C G C G A T A T C G A C T G A G T C G T C A A T G C A G T C C G T A A C T G C G T A
p-value:1e-21
log p-value:-4.892e+01
Information Content per bp:1.788
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.1 +/- 24.2bp
Average Position of motif in Background56.3 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTGGTGCCACAT
TTTGGCGCCAAA-
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCACAT
----ATGCCAACC
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCACAT-----
----ATGCCACGTCATCA
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCTGGTGCCACAT
-----TGACACCT
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCACAT
---GGTGCCAAGT
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCACAT
---CGTGCCAAG-
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCTGGTGCCACAT
---KTTCACACCT
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T
A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCTGGTGCCACAT-
------GCCACGTG
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCTGGTGCCACAT--
AGCTCGGCGCCAAAAGC
 A C G T A C G T C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCTGGTGCCACAT--------
-ANAGTGCCACCTGGTGGCCA
 C G A T T A G C A C G T C T A G A T C G A C G T T A C G G T A C A T G C C G T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A