Information for 8-CCCTGCTGGCAGCAGG (Motif 4)

A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A T C G A G T C A C G T C T A G A T G C A G T C C T G A A T C G G T A C C G T A A C T G A C T G C T A G
p-value:1e-12
log p-value:-2.927e+01
Information Content per bp:1.824
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.3 +/- 17.3bp
Average Position of motif in Background50.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CCCTGCTGGCAGCAGG---
-------CACAGCAGGGGG
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG-----
------DCHCAGCAGGRGGCC
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCTGCTGGCAGCAGG---
----CCACACAGCAGGAGA
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCTGCTGGCAGCAGG---
----CCACACAGCAGGAGA
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG-
-NNTGTAGGTAGCANNT
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T
A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG
----TGAGTCAGCA--
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCCTGCTGGCAGCAGG
-GGTGYTGACAGS---
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG-
-NNNTTAGGTAGCNTNT
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG--
-------GTCAGCANNTN
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CCCTGCTGGCAGCAGG-
---------CAGCTGNT
 A G T C G T A C A G T C A C G T A C T G A T G C A G C T A C T G A T C G A G T C C G T A A C T G A T G C C G T A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T