Information for 8-GGCGCCTGACAAT (Motif 9)

C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
Reverse Opposite:
C G T A A G C T A G C T A C T G A G C T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 30.3bp
Average Position of motif in Background41.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCGCCTGACAAT--
AAGCACCTGTCAATAT
 A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCCTGACAAT
NNGTCGCGTGNCAC-
 A C G T A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCGCCTGACAAT
---VGCTGWCAVB
 C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCGCCTGACAAT--
---GSCTGTCACTCA
 C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCTGACAAT
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCCTGACAAT
CGCCCCCTGACA--
 A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCCTGACAAT
TTTGGCGCCAAA----
 A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GGCGCCTGACAAT---
-------GACAATGNN
 C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCGCCTGACAAT
----GCTGTCAA-
 C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCTGACAAT
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A G T C A C G T A C T G C T G A A G T C C T G A C T G A A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T