Information for 8-GTCTAGGCCA (Motif 23)

A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
Reverse Opposite:
A G C T A C T G A C T G A G T C A G T C G A C T C T G A A C T G C G T A A T G C
p-value:1e-7
log p-value:-1.613e+01
Information Content per bp:1.876
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif85.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets60.2 +/- 27.3bp
Average Position of motif in Background46.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GTCTAGGCCA
--CTAGGCCT
 A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCTAGGCCA
CGTCTAGACA-
 A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCTAGGCCA
NTCAAGGTCA
 A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGGCCA
AGGTCAAGGTCA
 A C G T A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTCTAGGCCA
--CNAGGCCT
 A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGGCCA
CTGTCTGG----
 A C G T A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCTAGGCCA
BTCAAGGTCA
 A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTCTAGGCCA--
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCTAGGCCA
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCTAGGCCA-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A T C G A C G T A G T C A G C T C T G A A C T G A C T G A G T C A G T C T C G A A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G