Information for 3-AAACAACCAATATACA (Motif 3)

G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A
Reverse Opposite:
A C G T C A T G C G A T G T C A A C G T C G T A A C G T A C G T C T A G C T A G A C G T A C G T C A T G A C G T A C G T A C G T
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.726
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 26.9bp
Average Position of motif in Background42.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAACAACCAATATACA
AAAAAATCAATAAT--
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAACAACCAATATACA---
---AACCCAATAAAATTCG
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AAACAACCAATATACA
------CCAATAAAAA
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AAACAACCAATATACA----
------CTAATATTGCTAAA
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AAACAACCAATATACA----
------CTAATATTGCTAAA
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACAACCAATATACA-
-AAAAACCAATTAAGAA
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACAACCAATATACA
AAAAAATCGATAAT--
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAACAACCAATATACA-
-CAAAACCAATTAATTT
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AAACAACCAATATACA
------CCAATAAAAC
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAACAACCAATATACA-
-AACAACCAATTAATTC
 G T C A G T C A G T C A G A T C G T C A T C G A A G T C A G T C C G T A C G T A C G A T G T C A A C G T C G T A G A T C G T C A A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C