Information for 9-CTCACCTCCCTAG (Motif 15)

A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C T G T A C G C G T A A C T G A C T G A C G T A T C G C G T A A C T G
p-value:1e-4
log p-value:-1.102e+01
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 21.6bp
Average Position of motif in Background40.8 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCACCTCCCTAG
NNACTTACCTN-----
 A C G T A C G T A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCACCTCCCTAG
CCTCACCTG-----
 A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCACCTCCCTAG
-TGACCYCT----
 A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCACCTCCCTAG-
CTATCCCCGCCCTATT
 A C G T A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTCCCTAG
TCACACCT------
 A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCACCTCCCTAG
ATCACCCCAC---
 A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCACCTCCCTAG
-TGACCTYA----
 A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCACCTCCCTAG
NNCACCTGNN---
 A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTCCCTAG
TCACACCT------
 A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTCCCTAG
TCACACCT------
 A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C G T A G T C G T A C A G T C A C G T C G T A A C T G
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T