Information for 8-CATTTGATGAGCA (Motif 14)

A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C A C G T A G T C C G T A A C G T A G T C C G T A C G T A C G T A A C G T C T A G
p-value:1e-4
log p-value:-1.102e+01
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 13.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGATGAGCA--
NAATTTTACGAGNTNN
 A C G T A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATTTGATGAGCA
-NTTTTACGAGN-
 A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGATGAGCA--
ANATTTTACGAGNNNN
 A C G T A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATTTGATGAGCA
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CATTTGATGAGCA
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATTTGATGAGCA
--TTTTATTRGN-
 A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATTTGATGAGCA
---NTAATGAGCT
 A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATTTGATGAGCA
--TTTAAT-----
 A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTTGATGAGCA
-NTTTTACGAC--
 A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATTTGATGAGCA
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G A T A C G T A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A