Information for 3-AAGAAAAACAACC (Motif 3)

G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
Reverse Opposite:
T C A G A C T G G C A T A C G T A T C G A C G T C A G T A G C T C A G T A G C T G T A C A C G T C G A T
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.690
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.8 +/- 21.3bp
Average Position of motif in Background46.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGAAAAACAACC
-AAACAAACATTC
 G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Foxj3/MA0851.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAACAACC--
AAAAAGTAAACAAACAC
 A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAACAACC--
AAAAAGTAAACAAACAC
 A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAACAACC
AAACAGACAAAGGAAT
 A C G T A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAACAACC--
TAAATGTAAACAAAGGT
 A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAACAACC--
AAAATGTAAACAAACAG
 A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAACAACC--
AAAATGTAAACAAACAG
 A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAGAAAAACAACC
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGAAAAACAACC
-AAATAAACA---
 G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAAACAACC
WWATRTAAACAN--
 A C G T G C T A C G T A C A T G C T G A G T C A C T G A G C T A T G C A T A G C G T C A C G T A T G A C A G T C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T