Information for 3-TCGTAAACTA (Motif 11)

A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T A C G T G T C A A G T C C T A G C G T A
p-value:1e-7
log p-value:-1.649e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 28.3bp
Average Position of motif in Background48.6 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCGTAAACTA-----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0077.1_Hoxd12/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TCGTAAACTA--
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

FOXO3/MA0157.2/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCGTAAACTA
--GTAAACAA
 A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A
A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCGTAAACTA
GTCGTAAAAA-
 A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCGTAAACTA
GGTCGTAAAAA-
 A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCGTAAACTA
GGTCGTAAAAT-
 A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCGTAAACTA--
--GTTAACTAGN
 A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TCGTAAACTA--
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TCGTAAACTA-
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TCGTAAACTA-
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T G T C A C G T A C G T A A G T C A C G T C G T A A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G