Information for 4-AAGTAAACAG (Motif 6)

C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
Reverse Opposite:
A T G C A C G T C T A G C G A T A C G T A C G T T G C A A G T C A C G T C G A T
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif85.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.2 +/- 31.3bp
Average Position of motif in Background52.3 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAACAG
AAAGTAAACA-
 A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAACAG
AAAGTAAACA-
 A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAGTAAACAG-
AAGTAAACAAA
 C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AAGTAAACAG
AAATAAACA-
 C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:AAGTAAACAG
--GTAAACAG
 C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-AAGTAAACAG
WAAGTAAAYA-
 A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AAGTAAACAG--
NDGTAAACARRN
 C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G A C G T A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---AAGTAAACAG
NCTAAGTAAACA-
 A C G T A C G T A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--AAGTAAACAG---
CAAAGTAAACANNNN
 A C G T A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-AAGTAAACAG-
TATGTAAACANG
 A C G T C G T A C G T A C T A G A C G T G T C A C G T A C G T A G A T C C G T A T A C G A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G