Information for 3-CCCAGCTGGCTGGCCG (Motif 3)

A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A T G C A G T C T C G A A C T G A G T C A T G C C G T A A C T G A T G C A C G T A C T G C T A G A T C G
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 15.6bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTGGCTGGCCG
NAHCAGCTGD-------
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTGGCTGGCCG
DCHCAGCAGGRGGCC--
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTGGCTGGCCG
NAACAGCTGG-------
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCAGCTGGCTGGCCG
VNAVCAGCTGGC------
 A C G T A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTGGCTGGCCG
NNVCAGCTGB-------
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCAGCTGGCTGGCCG
NVCAGCTGBBNN----
 A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTGGCTGGCCG
NNGCAGCTGTC------
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTGGCTGGCCG
CAGCAGCTGN-------
 A C G T A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCAGCTGGCTGGCCG
AACAGATGGC------
 A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCAGCTGGCTGGCCG
-GCAGCTGTNN-----
 A T G C A G T C A G T C G T C A A T C G A G T C A C G T A T C G A C T G A G T C A G C T C T A G A T C G A G T C A G T C A C T G
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T