Information for 6-CGCTGCAGCGAGG (Motif 19)

A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C T G A G T C A C G T A C T G A G T C G T C A A C T G A G T C A T C G
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.2 +/- 17.7bp
Average Position of motif in Background25.6 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGCAGCGAGG--
NNNANTGCAGTGCNNTT
 A C G T A C G T A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCTGCAGCGAGG
CGCAGCTGCG---
 A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGCTGCAGCGAGG
-----CAGCC---
 A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGCTGCAGCGAGG
GGGCGGGACC----
 A C G T A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGCTGCAGCGAGG
CACAGCAGGGGG-
 A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGCAGCGAGG-
DCHCAGCAGGRGGCC
 A C G T A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGCAGCGAGG
TNTCCTGCTGTGNNG
 A C G T A C G T A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGCAGCGAGG-
NCGCAGCGGGGGGTC
 A C G T A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CGCTGCAGCGAGG------
----SCAGYCADGCATGAC
 A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCTGCAGCGAGG
---NGAAGC----
 A T G C A C T G A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C T G G T C A A C T G A C T G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T