Information for 11-CSCGGCTKCCCGRSCY (Motif 18)

A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
Reverse Opposite:
C T A G A C T G A T C G A G T C A G T C A T C G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A C T G T A G C A C T G
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.9 +/- 29.7bp
Average Position of motif in Background43.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CSCGGCTKCCCGRSCY
----GCTTCC------
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
----NNTTCCCGCCC-
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
----NCTTCCCGCCC-
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CSCGGCTKCCCGRSCY
CGCAGCTGCG------
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
-NCCACTTCCGG----
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
------TTCCCGCCWG
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

ELK4/MA0076.2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CSCGGCTKCCCGRSCY
--CCACTTCCGGC---
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CSCGGCTKCCCGRSCY
-----CTGCCCGCA--
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
---NGCTN--------
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CSCGGCTKCCCGRSCY
-----CTTCCGGT---
 A G T C A T C G A G T C A C T G A C T G A G T C A C G T A C G T A G T C G T A C A T G C A C T G C T A G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T