Information for 9-CCWGGGGCGT (Motif 15)

A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
Reverse Opposite:
G T C A G A T C A T C G A G T C A G T C G T A C A G T C C G T A A T C G A C T G
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.765
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif426.1
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets51.4 +/- 27.3bp
Average Position of motif in Background48.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCWGGGGCGT
GTCCCCAGGGGA--
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCWGGGGCGT
NGCCTGAGGCN-
 A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCWGGGGCGT
TGCCTGAGGCN-
 A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCWGGGGCGT-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCWGGGGCGT-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCWGGGGCGT
ATGCCCTGAGGC--
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCWGGGGCGT-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCWGGGGCGT--
GCTTCGTGGGGGGTCT
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCWGGGGCGT
WTGSCCTSAGGS--
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCWGGGGCGT
NGCCTNAGGCN-
 A C G T A C G T A G T C A T G C C G A T A C T G A C T G T C A G C T A G T A G C C T A G A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T