Information for 9-GMGATCACAACAGGAG (Motif 13)

A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G
Reverse Opposite:
A G T C A C G T A G T C G T A C G C A T A T C G G A C T A C G T A T C G C G A T A T C G C G T A A C G T A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.735
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 20.2bp
Average Position of motif in Background90.1 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GMGATCACAACAGGAG-
--GAGCACAGCAGGACA
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GMGATCACAACAGGAG-
--CCACACAGCAGGAGA
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:GMGATCACAACAGGAG-
-----CACAGCAGGGGG
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GMGATCACAACAGGAG-
--CCACACAGCAGGAGA
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GMGATCACAACAGGAG---
----DCHCAGCAGGRGGCC
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GMGATCACAACAGGAG
----DCTCAGCAGG--
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GMGATCACAACAGGAG
-ATGTCACAACAACAC
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GMGATCACAACAGGAG
-----AACATCTGGA-
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GMGATCACAACAGGAG--
--------ANCAGGATGT
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GMGATCACAACAGGAG-
----NAACATCTGGATN
 A C T G G T C A T A C G T G C A C G A T A T G C C G T A A T G C C G T A C G T A A T G C C G T A A C T G A C T G C G T A T A C G A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G