Information for 6-AGACGCCTGA (Motif 10)

C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A
Reverse Opposite:
A C G T G A T C G T C A A C T G A C T G G T A C C T A G C G A T A G T C A G C T
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.842
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif136.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets46.2 +/- 20.8bp
Average Position of motif in Background49.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGACGCCTGA
CAAGACGCCTTA
 A C G T A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGACGCCTGA
--AGGCCTNG
 C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGACGCCTGA---
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGACGCCTGA-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGACGCCTGA---
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACGCCTGA
CCAGACRSVB--
 A C G T A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACGCCTGA----
---TGCCTGAGGCN
 C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGACGCCTGA----
---AGCCTCAGGCA
 C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGACGCCTGA----
---NGCCTGAGGCN
 C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGACGCCTGA---
NNGTCGCGTGNCAC
 A C G T C T G A C T A G C G T A G A T C A C T G A G T C A G T C A C G T C A T G G T C A A C G T A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C