Information for 5-CAYAGYGSACCCYSMG (Motif 9)

A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G
Reverse Opposite:
A G T C A C T G A T C G C T A G A C T G A T C G A C T G A C G T A T G C G T A C C T G A A G T C A G C T C T A G A G C T A C T G
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.837
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 23.7bp
Average Position of motif in Background67.9 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAYAGYGSACCCYSMG--
-NNNNGGTACCCCCCANN
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAYAGYGSACCCYSMG
--NCGCGGACGTTG--
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CAYAGYGSACCCYSMG-----
-------GACCCCCCGCGAAG
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAYAGYGSACCCYSMG--
-NNANTTGACCCCTNNNN
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAYAGYGSACCCYSMG
-ACAAAGGNBCCT---
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAYAGYGSACCCYSMG----
---AGGAGACCCCCAATTTG
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAYAGYGSACCCYSMG
CGAACAGTGCTCACTAT-
 A C G T A C G T A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAYAGYGSACCCYSMG---
---TATCGACCCCCCACAG
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CAYAGYGSACCCYSMG
NGGTACACNGTGTTCCC----
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CAYAGYGSACCCYSMG------
-------GACCCCCCGCTGCGC
 A G T C C T G A A G T C C T G A A C T G A G C T A C T G A T C G C G T A A G T C A T G C A G T C A G T C A T G C G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C