Information for 4-CTGCAGGCAGTTCCAG (Motif 7)

A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
Reverse Opposite:
A G T C C A G T A C T G A T C G G T C A C G T A G T A C C G A T A C T G A G T C A G T C G A C T A C T G G T A C C G T A A C T G
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.761
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.4 +/- 23.8bp
Average Position of motif in Background57.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGCAGTTCCAG
CACAGCAGGGGG------
 A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGCAGTTCCAG
DCTCAGCAGG---------
 A C G T A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGCAGTTCCAG
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCAGGCAGTTCCAG
--ACAGGAAGTG----
 A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCAGGCAGTTCCAG
--ACAGGAAGTG----
 A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGCAGTTCCAG
-TNNGGGCAG------
 A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGCAGTTCCAG
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGCAGTTCCAG
AGCCTCAGGCA-------
 A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGCAGTTCCAG
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGCAGGCAGTTCCAG
ATTGCCTCAGGCAAT-----
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G A G T C C T G A A C T G C T A G G T A C C G T A A C T G G C A T A C G T A T G C G T A C G C T A C T A G
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T A C G T A C G T A C G T