Information for 12-CCTCGCCTTC (Motif 20)

A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G C T A G A G T C A C T G C T G A A T C G A C T G
p-value:1e-6
log p-value:-1.458e+01
Information Content per bp:1.929
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif67.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets50.8 +/- 21.1bp
Average Position of motif in Background54.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTCGCCTTC-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CCTCGCCTTC-
-----GCTTCC
 A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTCGCCTTC
NNACTTGCCTT-
 A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCCTTC----
GCCCCGCCCCCTCCC
 A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTCGCCTTC--
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCCTTC
GCCACGCCCCC
 A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCCTTC
GCCCCGCCCCC
 A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCCTTC
AGCGCGCC---
 A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCTCGCCTTC---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTCGCCTTC---
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T