Information for 9-GGACACTGTTCTG (Motif 15)

A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G T C G A C G T A A G T C G T C A A T C G C G A T A C T G A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.7 +/- 20.7bp
Average Position of motif in Background30.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGACACTGTTCTG-----
-NNCTTTGTTTTGNTNNN
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGACACTGTTCTG
--CCATTGTTTT-
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGACACTGTTCTG--
TGGACTTTGNNCTNTG
 A C G T A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGACACTGTTCTG
NAGGTCANTGACCT-
 A C G T A C G T A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGACACTGTTCTG-
TGGACTTTGNNCTCN
 A C G T A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGACACTGTTCTG
---CTTTGT----
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGACACTGTTCTG--
-----CTGTTCCTGG
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGACACTGTTCTG
--CCATTGTTYB-
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGACACTGTTCTG
--YCTTTGTTCC-
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGACACTGTTCTG
--CCWTTGTYYB-
 A C T G T C A G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A G C T A G T C A C G T A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T