Information for 7-GGGGAAAGGTGAG (Motif 11)

A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
Reverse Opposite:
A T G C A G C T G T A C G T C A A T G C A G T C A G C T C A G T A C G T A T G C G T A C A G T C T A G C
p-value:1e-10
log p-value:-2.438e+01
Information Content per bp:1.772
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.0 +/- 22.4bp
Average Position of motif in Background53.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGTGAG
TAGGGCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAAGGTGAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAAAGGTGAG
TGGGGCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGGAAAGGTGAG
ANGNAAAGGTCA-
 A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GGGGAAAGGTGAG---
-----CAGGTAAGTAT
 A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGTGAG
GAGGTCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGTGAG
GAGGTCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAAGGTGAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGTGAG
GGGGTCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGTGAG
GGGGTCAAAGGTCA-
 A C G T A C G T A T C G C T A G C A T G T A C G C G T A G C T A C T G A A C T G T A C G C A G T A C T G C T G A A T C G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T