Information for 12-TRTCACGTGACAC (Motif 20)

A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
Reverse Opposite:
A C T G A G C T A C T G A C G T A T G C C G T A G T A C A C T G A C G T A C T G G T C A A G T C T G C A
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets70.2 +/- 22.2bp
Average Position of motif in Background54.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE41/MA0636.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-GTCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-GTCACGTGACYV
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-ATCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:4
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-ATCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-ATCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:TRTCACGTGACAC-
--TCACGTGACCGG
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C A C G T
A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

MLX/MA0663.1/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TRTCACGTGACAC
-ATCACGTGAT--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TRTCACGTGACAC
--NCACGTGACN-
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-ATCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TRTCACGTGACAC
-ATCACGTGAC--
 A C G T C T A G A C G T G T A C C G T A A G T C A C T G A C G T A T C G C G T A A G T C T C G A G T A C
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T