Information for 8-TGTGGTGTCCAMA (Motif 8)

G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
Reverse Opposite:
G A C T A C G T C A G T A C T G A C T G G C T A G T A C G T C A A G T C A G T C C T G A A G T C C G T A
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.713
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets57.5 +/- 23.4bp
Average Position of motif in Background52.7 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTGTCCAMA
CTGTGGTTTN----
 A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTGTCCAMA
NNTGTGGTTT-----
 A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTGTCCAMA
NNHTGTGGTTWN----
 A C G T A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTGTCCAMA
GCTGTGGTTT-----
 A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTGTCCAMA-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTGTCCAMA
GTCTGTGGTTT-----
 A C G T A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTGTCCAMA
TTTGCGGTTT-----
 A C G T A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTGTCCAMA
TTGCGGTTT-----
 A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTGTCCAMA---
NTNNCGTATCCAAGTNN
 A C G T G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTGGTGTCCAMA---
GGGTGTGCCCAAAAGG
 G C A T C T A G G A C T C T A G A C T G A C G T A C T G C G A T A G T C A G T C G C T A T G C A C T G A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G