Information for 5-CCATATNATGAGTAAA (Motif 9)

G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A
Reverse Opposite:
A C G T C A G T A C G T C G T A T G A C A C G T G A T C G C T A C G A T G T C A G C T A C G A T C T G A A C G T A C T G C A T G
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.623
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 27.2bp
Average Position of motif in Background33.2 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CCATATNATGAGTAAA--
--------AAAGTAAACA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.60
Offset:10
Orientation:forward strand
Alignment:CCATATNATGAGTAAA
----------ATTAAA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:CCATATNATGAGTAAA--
--------AAAGTAAACA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCATATNATGAGTAAA--
----AATATTAATAAAGA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CCATATNATGAGTAAA--
--------WAAGTAAAYA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCATATNATGAGTAAA------
-------CAAAGTAAACANNNN
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCATATNATGAGTAAA---
--NNNTTTTAATTAANNNN
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCATATNATGAGTAAA--
------NCTAAGTAAACA
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCATATNATGAGTAAA----
--------TATGTAAACANG
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCATATNATGAGTAAA-------
------AAAAAGTAAACAAAGAC
 G T A C G T A C G T C A G A C T C G T A C G A T A C G T G C T A C A G T C T A G C G T A A C T G G A C T C G T A G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C