Information for 4-GTCGCCATGT (Motif 7)

A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C G T A C T G A T C G A G T C C T A G G C T A A G T C
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.868
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.2 +/- 27.2bp
Average Position of motif in Background64.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCGCCATGT--
GCCGCCATCTTG
 A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTCGCCATGT--
GCNGCCATCTTG
 A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCGCCATGT---
NGTTGCCATGGCAA
 A C G T A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCGCCATGT----
GTTGCCATGGNAAC
 A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCGCCATGT
GTCCGCCATTA
 A C G T A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTCGCCATGT--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCGCCATGT---
GGTTGCCATGGCAA
 A C G T A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTCGCCATGT----
----CCATGTGCTT
 A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCCATGT
CTGTTGCTAGGS
 A C G T A C G T A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCGCCATGT-----
GTTGCCATGGCAACM
 A C T G C G A T A G T C A C T G A T G C A G T C C G T A C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C