Information for 3-NGAGRAATATTCTACC (Motif 5)

C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
Reverse Opposite:
A C T G A C T G G A C T C T G A A C T G G C T A C T G A G A C T C G T A A C G T C G A T A G T C A G T C G C A T G T A C A G T C
p-value:1e-12
log p-value:-2.823e+01
Information Content per bp:1.620
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.5 +/- 20.0bp
Average Position of motif in Background50.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:NGAGRAATATTCTACC------
------ACATGCTACCTAATAC
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:NGAGRAATATTCTACC------
------ACTTGCTACCTACACC
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----NGAGRAATATTCTACC
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:NGAGRAATATTCTACC
-----CACATTCCAT-
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:NGAGRAATATTCTACC
-YDGHTACAWTGTADC
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:NGAGRAATATTCTACC--
--GATAACATCCTAGTAG
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C A C G T A C G T
A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:NGAGRAATATTCTACC-----
----ANANNTGATACCCNATN
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:NGAGRAATATTCTACC
-TWGHWACAWTGTWDC
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:NGAGRAATATTCTACC
-----CACATTCCAT-
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:NGAGRAATATTCTACC-----
----AATNTTGATACCCTATN
 C T A G A C T G C G T A C T A G T C A G G C T A T G C A A C G T C G T A A G C T C A G T T G A C A G C T C G T A G T A C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T