Information for 5-AGGACAMAKTTAT (Motif 3)

C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T C G T A C G T A G T A C A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 18.0bp
Average Position of motif in Background49.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGACAMAKTTAT
TRAGGTCA-------
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGACAMAKTTAT
AAGGTCAC------
 A C G T C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGACAMAKTTAT
AGGAAACAGCTG-
 C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGACAMAKTTAT
CAAGGHCANV-----
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGGACAMAKTTAT
ATTTACGACAAATAGC-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGACAMAKTTAT
AGGTCA-------
 C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGACAMAKTTAT
AAAACAAAGG---
 C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGACAMAKTTAT
GGAACAAAGR---
 C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGACAMAKTTAT
TCAAGGTCAN------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGGACAMAKTTAT
---ACAAAG----
 C G T A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T C T G A A C G T
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T